Pipelines and tools

Our lab has contributed to various bioinformatic tools used to parse through genetic data, several of which include:

  • A web tool for identifying inter-organ signaling from population correlation structure: gdcat.org

Associated publication

  • Using genetic correlations structure to infer endocrine signaling: https://github.com/marcus-seldin/QENIE

Associated publication

  • Genetic survey of myokine interactions with metabolic tissues: https://github.com/Leandromvelez/myokine-signaling

Associated publication

  • Leveraging gene regulatory networks to define genetic contributions to cardiometabolic disease: http://starnet.mssm.edu/

Associated publication

  • Web-based tool to analyze multi-omic genetic data: https://coffeeprot.com/

Associated publication

  • Crosstissue survey of circadian-enriched genesets: https://github.com/marcus-seldin/endocrine_communication-nonrestored-clocks

Associated publication