Dr. Trina Norden-Krichmar retired from UCI at the end of Winter quarter 2024. She will remain affiliated with UCI as an Emeritus Associate Professor.
University of California, Irvine
by tnordenk
Dr. Trina Norden-Krichmar retired from UCI at the end of Winter quarter 2024. She will remain affiliated with UCI as an Emeritus Associate Professor.
by tnordenk
Listopad, S., Magnan, C., Day, L.Z., Asghar, A., Stolz, A., Tayek, J.A., Liu, Z.X., Jacobs, J.M., Morgan, T.R., Norden-Krichmar, T.M. (2024) “Identification of integrated proteomics and transcriptomics signature of alcohol-associated liver disease using machine learning”, PLOS Digital Health, 3(2), doi.org/10.1371/journal.pdig.0000447.
by tnordenk
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Liu, X., Liu, Z.X., Morgan, T.R., and Norden-Krichmar, T.M. (2023) Single-cell transcriptomics of peripheral blood mononuclear cells indicates impaired immune and inflammatory responses in alcohol-associated hepatitis. Human Immunology, doi.org/10.1016/j.humimm.2023.110735
by tnordenk
Thangavelu, C.S. and Norden-Krichmar, T.M. (2023) Integrative Meta-Analysis during Induced Pluripotent Stem Cell Reprogramming Reveals Conserved Networks and Chromatin Accessibility Signatures in Human and Mouse. BioMedInformatics, 3, 1015-1039, doi.org/10.3390/biomedinformatics3040061
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We would like to congratulate our lab member, Chloe Thangavelu, for successfully defending her dissertation on September 1, 2023, to achieve her Ph.D. in Biomedical Sciences at UC Irvine.
Her dissertation was entitled:
“Deciphering Cellular Reprogramming: Mechanistic Insights for Disease Modeling, Pharmaceutical Testing, and AI-Driven Drug Discovery”
Dissertation Committee:
Trina Norden-Krichmar (Chair)
Kai Kessenbrock
Marcus Seldin
Congratulations and all the best to Dr. Thangavelu!
by tnordenk
Here is a picture from the UCI Graduate Hooding Ceremony at Bren Center on June 17, 2023.
Pictured from left to right:
Chloe Thangavelu, Xiaochen Liu, Trina Norden-Krichmar, Jeff Krichmar, Kexin Chen, and Jinwei Xing.
Chloe and Xiaochen are members of the Norden-Krichmar lab.
Kexin and Jinwei are members of Jeff Krichmar’s Cognitive Anteaters Robotics Lab.
Congratulations to the 2023 PhD graduates!! We are so proud of you all!!
by tnordenk
We would also like to congratulate our lab member, Xiaochen Liu, for successfully defending her dissertation on May 23, 2023, to achieve her Ph.D. in Epidemiology at UC Irvine.
Her dissertation was entitled:
“Genomic Factors Underlying Alcohol-associated and Viral Hepatitis”
Dissertation Committee:
Trina Norden-Krichmar (Chair)
Karen L. Edwards
Hannah L. Park
Congratulations and all the best to Dr. Liu!
by tnordenk
We would like to congratulate our lab member, Stanislav Listopad, for successfully defending his dissertation on November 18, 2022, to achieve his Ph.D. in Computer Science at UC Irvine.
His dissertation was entitled:
“Towards integrated genomics data analyses to facilitate identification of diagnostic biomarkers”
Dissertation Committee:
Trina Norden-Krichmar (Chair)
Xiaohui Xie
Ali Mortazavi
Congratulations and best wishes to Dr. Listopad!
by tnordenk
Some of the members of the Norden-Krichmar lab attended the ASHG conference this year to present posters. This was the first in-person meeting of ASHG since October 2019. There were over 7,000 attendees this year. ASHG is the largest human genetics conference in the world. Masks were optional but recommended, so we wore them, except for the brief photo-ops to take these pictures. The abstract titles are listed below.
Top row, left to right: Xiaochen Liu, Tulika Kakati, Stanislav Listopad
Bottom row, left to right: Kevin Yuan, and Trina Norden-Krichmar (standing by Chloe Thangavelu’s poster).
Left to right: Kevin Yuan, Trina Norden-Krichmar, Tulika Kakati, Xiaochen Liu, and Stanislav Listopad
Another picture in the Los Angeles Convention Center lobby.
Posters presented (in alphabetical order):
Listopad, Stanislav and Norden-Krichmar, T.M. “Combination of annotation enrichment approaches for characterization of blood-based RNA sequencing biomarkers”, poster presentation at the American Society of Human Genetics (ASHG) conference in Los Angeles, CA, October 25-29, 2022.
Liu, Xiaochen and Norden-Krichmar, T.M. “Evaluation of cell type annotation for peripheral blood mononuclear cells using single-cell RNA versus a deconvolution approach with bulk RNA sequencing”, poster presentation at the American Society of Human Genetics (ASHG) conference in Los Angeles, CA, October 25-29, 2022.
Kakati, Tulika, Bhattacharyya, D.K., Kalita, J.K., and Norden-Krichmar, T.M. “D-CoMEx: Differential co-expressed module extraction to identify phenotype-specific miRNA biomarkers related to diseases”, poster presentation at the American Society of Human Genetics (ASHG) conference in Los Angeles, CA, October 25-29, 2022.
Thangavelu, Chloe and Norden-Krichmar, T.M. “Network analysis across cellular reprogramming states”, poster presentation at the American Society of Human Genetics (ASHG) conference in Los Angeles, CA, October 25-29, 2022.
Yuan, Kun (Kevin), Lucia, R.M., Huang, W.-L., Forman, D., Goodman, D., Ziogas, A., Park, H.L., and Norden-Krichmar, T.M. “Differentially methylated probes and regions associated with the Healthy Eating Index”, poster presentation at the American Society of Human Genetics (ASHG) conference in Los Angeles, CA, October 25-29, 2022.